Recent developments in lipidomics and metabolomics have highlighted persistent challenges in data processing, statistical analysis, and visualization—areas that often hinder reproducibility, transparency, and accessibility within the field. A newly published guideline addresses these issues by presenting a comprehensive, code-based framework for the statistical treatment and graphical representation of omics data using R and Python. LCGC International spoke to Michal Holcapek and Jakub Idkowiak about the rationale behind this research and the benefits it offers separation scientists.